| Human predictome | Nov 12, 2025 | Predictions for the top 1.6 million protein pairs nominated by the classified KIRC across all possible PPIs in the human proteome. | 1,608,421 | 20,175 | publication |
| H. sapiens genome maintenance | Sep 5, 2023 | An all by all matrix of ~280 human genome maintenance proteins folded as pairs in three AlphaFold multimer models (1, 2, 4) with templates enabled. | 40,176 | 285 | publication |
| H. sapiens H2A/H2B vs. nuclear proteome | Jun 28, 2024 | A human H2A/H2B dimer was run against 7,608 nuclear proteins with 3 AlphaFold multimer v3 models. | 7,608 | 7,608 | publication |
| H. sapiens EndoMap | May 28, 2025 | Binary human pairs from cross linking mass spectrometry data of endosomes folded with AlphaFold-multimer. | 4,162 | 3,569 | publication |